About Me
I am a freelance Bioinformatician and Data Scientist providing consulting services to clients in industry and academia to help them make sense of their data. Previously I lead bioinformatics, data science, and IT for several years at a cancer diagnostics company, working on precision medicine, genomics, and liquid biopsies. Additionally, I conduct research in affiliation with Lund University in Sweden.
My main interest is in using computational methods and biological/medical data to improve our understanding and treatment of diseases. Many of my projects, including my doctoral thesis, have been focused on cancer in humans. Additionally I work on improving open source bioinformatics and reproducible research infrastructure by contributing to projects such as conda-forge, Bioconda, and Biopython.
Over the past 20 years I have contributed to a number of open source software projects, most notably the FreeBSD computer operating system. A rough overview can be found on GitHub and OpenHub.
- Bioinformatics and Data Science
- Disease Biology and Diagnostics
- Open Source Software
- Software Engineering
PhD in Medical Science (Bioinformatics and Cancer Genomics)
Lund University, Sweden
MSc in Bioinformatics
Lund University, Sweden
BSc in Scientific Programming
Aachen University of Applied Sciences, Germany
Consulting
I’m available for consulting opportunities in industry and academia through my company InSilico Consulting AB. With a decade of experience in bioinformatics, biomedical data science, genomics, and diagnostics, as well as over two decades in IT to draw from I can help you make sense of your data. For more details on my experience, please see About Me and my publications and public talks.
Areas I can help you with include, but are not limited to
- Genomics, Transcriptomics, and other Omics analyses
- Clinical data analysis
- Cancer/oncology-related applications, such as liquid biopsy
- Computational pipeline/workflow development
- Data processing, cleaning, integration, and visualization
- Machine learning
- Software development
Get in touch
For consulting inquiries, please contact me via email or LinkedIn.
Projects
Featured Publications
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EMBO Molecular Medicine, 2020. 12(10):e12118
DOI PDF bioRxiv Preprint Code Dataset Press Release PhD Project
Nature Methods, 2018. 15(7):475–476
Recent Publications
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Annals of Oncology, 2023. 34:S536, Supplement 2
International Journal of Gynecologic Cancer, 2023. 33:A38-A39
Contact
- [email protected]
- Lund, Sweden
- Connect on Twitter
- Connect on LinkedIn